Add ESM secondary structure checkpoint

config.json

@@ -0,0 +1,51 @@
+{
+  "architectures": [
+    "EsmForTokenClassification"
+  ],
+  "attention_probs_dropout_prob": 0.0,
+  "classifier_dropout": null,
+  "dtype": "float32",
+  "emb_layer_norm_before": false,
+  "esmfold_config": null,
+  "hidden_act": "gelu",
+  "hidden_dropout_prob": 0.0,
+  "hidden_size": 320,
+  "id2label": {
+    "0": ".",
+    "1": "B",
+    "2": "E",
+    "3": "G",
+    "4": "H",
+    "5": "I",
+    "6": "P",
+    "7": "S",
+    "8": "T"
+  },
+  "initializer_range": 0.02,
+  "intermediate_size": 1280,
+  "is_folding_model": false,
+  "label2id": {
+    ".": 0,
+    "B": 1,
+    "E": 2,
+    "G": 3,
+    "H": 4,
+    "I": 5,
+    "P": 6,
+    "S": 7,
+    "T": 8
+  },
+  "layer_norm_eps": 1e-05,
+  "mask_token_id": 32,
+  "max_position_embeddings": 1026,
+  "model_type": "esm",
+  "num_attention_heads": 20,
+  "num_hidden_layers": 6,
+  "pad_token_id": 1,
+  "position_embedding_type": "rotary",
+  "token_dropout": true,
+  "transformers_version": "4.57.2",
+  "use_cache": true,
+  "vocab_list": null,
+  "vocab_size": 33
+}

label_maps.pt

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:0a8177039aae269fcc5ad46bea885dbef86047d35c24d73d667ee0bc316c84f3
+size 1407

model.safetensors

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:c35619417bcdc321dff616ea7b94e3ebf4071763d528b901088d6cd9acbe187d
+size 29660248

special_tokens_map.json

@@ -0,0 +1,7 @@
+{
+  "cls_token": "<cls>",
+  "eos_token": "<eos>",
+  "mask_token": "<mask>",
+  "pad_token": "<pad>",
+  "unk_token": "<unk>"
+}

tokenizer_config.json

@@ -0,0 +1,53 @@
+{
+  "added_tokens_decoder": {
+    "0": {
+      "content": "<cls>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "1": {
+      "content": "<pad>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "2": {
+      "content": "<eos>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "3": {
+      "content": "<unk>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    },
+    "32": {
+      "content": "<mask>",
+      "lstrip": false,
+      "normalized": false,
+      "rstrip": false,
+      "single_word": false,
+      "special": true
+    }
+  },
+  "clean_up_tokenization_spaces": false,
+  "cls_token": "<cls>",
+  "eos_token": "<eos>",
+  "extra_special_tokens": {},
+  "mask_token": "<mask>",
+  "model_max_length": 1000000000000000019884624838656,
+  "pad_token": "<pad>",
+  "tokenizer_class": "EsmTokenizer",
+  "unk_token": "<unk>"
+}

training_args.bin

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:ac23411556c153dbeedb2f7c5e66fbba0010317c9102e972255f4619e15ee463
+size 5777

vocab.txt

@@ -0,0 +1,33 @@
+<cls>
+<pad>
+<eos>
+<unk>
+L
+A
+G
+V
+S
+E
+R
+T
+I
+D
+P
+K
+Q
+N
+F
+Y
+M
+H
+W
+C
+X
+B
+U
+Z
+O
+.
+-
+<null_1>
+<mask>