#!/usr/bin/env python3 # /// script # requires-python = ">=3.10" # dependencies = [ # "datasets", # "requests", # "huggingface-hub", # ] # /// """ Daily sync for huggingface/trending-papers-x dataset. Indexes new papers and updates GitHub/project URLs via HF Papers API. Run locally: uv run daily_papers_sync.py Run as HF Job: hf jobs uv run daily_papers_sync.py --secrets HF_TOKEN """ from __future__ import annotations import argparse import os import re import time from dataclasses import dataclass from datetime import datetime, timezone from typing import Any, Optional from urllib.parse import urlparse import requests from datasets import load_dataset REPO_ID = "huggingface/trending-papers-x" API_BASE = "https://huggingface.co/api" DEFAULT_LIMIT = 150 DEFAULT_SLEEP_AFTER_INDEX_SECONDS = 30 # Regex patterns for arXiv ID validation _ARXIV_URL_RE = re.compile( r"https?://(?:www\.)?arxiv\.org/(?:abs|pdf)/(?P[^?#]+)", re.I ) _ARXIV_NEW_RE = re.compile(r"^\d{4}\.\d{4,5}$") @dataclass class Candidate: arxiv_id: str github_repo: Optional[str] project_page: Optional[str] added_at: Optional[datetime] source: Optional[str] @dataclass class CandidateStats: link_rows_checked: int = 0 already_indexed: int = 0 status_errors: int = 0 def normalize_arxiv_id(value: Any) -> Optional[str]: """Extract and validate arXiv ID from various formats.""" if not value: return None s = str(value).strip() # Extract from URL if present if m := _ARXIV_URL_RE.search(s): s = m.group("id") s = s.strip().rstrip("/") if s.lower().endswith(".pdf"): s = s[:-4] if s.lower().startswith("arxiv:"): s = s[6:] # Remove version suffix s = re.sub(r"v\d+$", "", s) # Validate new-style arXiv ID format if not _ARXIV_NEW_RE.fullmatch(s): return None # Validate month (positions 2-3) month = int(s[2:4]) return s if 1 <= month <= 12 else None def normalize_github_repo(value: Any) -> Optional[str]: """Extract and normalize GitHub repo URL.""" if not value: return None s = str(value).strip() if s.startswith("git@github.com:"): s = f"https://github.com/{s[15:]}" elif s.startswith("github.com/"): s = f"https://{s}" p = urlparse(s) if p.scheme not in ("http", "https"): return None host = (p.netloc or "").lower().removeprefix("www.") if host != "github.com": return None parts = [x for x in p.path.split("/") if x] if len(parts) < 2: return None owner, repo = parts[0], parts[1].removesuffix(".git") return f"https://github.com/{owner}/{repo}" def normalize_url(value: Any) -> Optional[str]: """Validate and normalize a URL.""" if not value: return None s = str(value).strip() p = urlparse(s) return s if p.scheme in ("http", "https") and p.netloc else None def parse_date(value: Any) -> Optional[datetime]: """Parse date string into datetime.""" if isinstance(value, datetime): return value.replace(tzinfo=timezone.utc) if value.tzinfo is None else value if not value: return None for fmt in [ "%Y-%m-%dT%H:%M:%S.%fZ", "%Y-%m-%dT%H:%M:%SZ", "%Y-%m-%dT%H:%M:%S.%f", "%Y-%m-%dT%H:%M:%S", "%Y-%m-%d", ]: try: dt = datetime.strptime(str(value).strip(), fmt) return dt.replace(tzinfo=timezone.utc) except ValueError: continue return None def parse_args() -> argparse.Namespace: """Parse CLI args; scheduled jobs use mutating defaults.""" parser = argparse.ArgumentParser( description="Index missing trending-papers-x rows with extracted links." ) parser.add_argument( "--dry-run", action="store_true", help="Preview candidates without calling write endpoints.", ) parser.add_argument( "--limit", type=int, default=DEFAULT_LIMIT, help=f"Maximum missing link-bearing rows to process. Defaults to {DEFAULT_LIMIT}.", ) parser.add_argument( "--sleep-after-index", type=float, default=DEFAULT_SLEEP_AFTER_INDEX_SECONDS, help="Seconds to wait after successful indexing before updating links.", ) return parser.parse_args() def get_token() -> str: """Get HF token from environment or huggingface-cli.""" if token := os.environ.get("HF_TOKEN", "").strip(): return token try: from huggingface_hub import HfFolder return (HfFolder.get_token() or "").strip() except Exception: return "" def get_paper_status( session: requests.Session, arxiv_id: str ) -> tuple[str, Optional[int], Optional[str]]: """Check whether a paper is already indexed.""" try: r = session.get(f"{API_BASE}/papers/{arxiv_id}", timeout=30) except requests.RequestException as e: return "error", None, str(e) if r.status_code == 200: return "indexed", r.status_code, None if r.status_code == 404: return "missing", r.status_code, None return "error", r.status_code, r.text[:500] def iter_candidates( session: requests.Session, limit: int ) -> tuple[list[Candidate], CandidateStats]: """Select live-missing trending papers that have link metadata.""" dataset = load_dataset(REPO_ID, split="train", streaming=True) candidates: list[Candidate] = [] stats = CandidateStats() seen: set[str] = set() for row in dataset: if len(candidates) >= limit: break arxiv_id = normalize_arxiv_id(row.get("arxiv_id") or row.get("paper_id")) if not arxiv_id or arxiv_id in seen: continue github_repo = normalize_github_repo(row.get("github") or row.get("github_url")) project_page = normalize_url( row.get("project_page_url") or row.get("project_page") ) if not github_repo and not project_page: continue seen.add(arxiv_id) stats.link_rows_checked += 1 status, http_status, error = get_paper_status(session, arxiv_id) if status == "indexed": stats.already_indexed += 1 continue if status == "error": stats.status_errors += 1 print( f"ERROR: {arxiv_id} - failed to check paper status" f" (status={http_status}, error={error})" ) continue candidates.append( Candidate( arxiv_id=arxiv_id, github_repo=github_repo, project_page=project_page, added_at=parse_date(row.get("added_at")), source=row.get("source"), ) ) return candidates, stats def index_paper( session: requests.Session, arxiv_id: str ) -> tuple[str, Optional[int], Optional[str]]: """Index a paper by arXiv ID.""" try: r = session.post( f"{API_BASE}/papers/index", json={"arxivId": arxiv_id}, timeout=30 ) except requests.RequestException as e: return "error", None, str(e) if r.status_code == 200: return "indexed", r.status_code, None if r.status_code == 409: return "already-indexed", r.status_code, None return "error", r.status_code, r.text[:500] def update_paper_links( session: requests.Session, arxiv_id: str, github_repo: Optional[str] = None, project_page: Optional[str] = None, ) -> tuple[str, Optional[int], Optional[str]]: """Update GitHub repo and/or project page for a paper.""" payload = {} if github_repo: payload["githubRepo"] = github_repo if project_page: payload["projectPage"] = project_page if not payload: return "skipped", None, "no links to update" try: r = session.post( f"{API_BASE}/papers/{arxiv_id}/links", json=payload, timeout=30 ) except requests.RequestException as e: return "error", None, str(e) if r.status_code == 200: return "updated", r.status_code, None if r.status_code == 409: return "already-updated", r.status_code, None return "error", r.status_code, r.text[:500] def main() -> None: args = parse_args() if args.limit < 1: print("ERROR: --limit must be greater than 0") exit(1) token = get_token() if not token: print("ERROR: HF token not found. Set HF_TOKEN or run `huggingface-cli login`.") exit(1) session = requests.Session() session.headers.update( { "Content-Type": "application/json", "Authorization": f"Bearer {token}", } ) print(f"Dataset: {REPO_ID}") print(f"Limit: {args.limit} live-missing link-bearing papers") print(f"Mode: {'dry-run' if args.dry_run else 'apply'}") print("-" * 50) candidates, candidate_stats = iter_candidates(session, args.limit) if candidates: first_added_at = ( candidates[0].added_at.isoformat() if candidates[0].added_at else "unknown" ) last_added_at = ( candidates[-1].added_at.isoformat() if candidates[-1].added_at else "unknown" ) print(f"Candidates: {len(candidates)} ({first_added_at} -> {last_added_at})") else: print("Candidates: 0") print("-" * 50) stats = { "indexed": 0, "already_indexed": 0, "links": 0, "dry_run": 0, "index_errors": 0, "link_errors": 0, } for candidate in candidates: pieces = [ candidate.arxiv_id, f"added_at={candidate.added_at.isoformat() if candidate.added_at else 'unknown'}", f"source={candidate.source or 'unknown'}", ] if candidate.github_repo: pieces.append(f"github={candidate.github_repo}") if candidate.project_page: pieces.append(f"project={candidate.project_page}") if args.dry_run: stats["dry_run"] += 1 print("DRY RUN: " + " | ".join(pieces)) continue index_status, index_http_status, index_error = index_paper( session, candidate.arxiv_id ) if index_status == "indexed": stats["indexed"] += 1 print(f"INDEXED: {' | '.join(pieces)}") if args.sleep_after_index > 0: time.sleep(args.sleep_after_index) elif index_status == "already-indexed": stats["already_indexed"] += 1 print(f"ALREADY INDEXED: {' | '.join(pieces)}") else: stats["index_errors"] += 1 print( f"ERROR: {candidate.arxiv_id} - failed to index" f" (status={index_http_status}, error={index_error})" ) continue links_status, links_http_status, links_error = update_paper_links( session, candidate.arxiv_id, candidate.github_repo, candidate.project_page, ) if links_status in {"updated", "already-updated"}: stats["links"] += 1 print(f"LINKS {links_status.upper()}: {candidate.arxiv_id}") else: stats["link_errors"] += 1 print( f"ERROR: {candidate.arxiv_id} - failed to update links" f" (status={links_http_status}, error={links_error})" ) print("-" * 50) print(f"Link-bearing rows checked: {candidate_stats.link_rows_checked}") print(f"Already indexed while selecting: {candidate_stats.already_indexed}") print(f"Status check errors: {candidate_stats.status_errors}") print(f"Candidates: {len(candidates)}") print(f"Indexed: {stats['indexed']}") print(f"Already indexed: {stats['already_indexed']}") print(f"Links updated: {stats['links']}") print(f"Dry run: {stats['dry_run']}") print(f"Index errors: {stats['index_errors']}") print(f"Link errors: {stats['link_errors']}") if stats["index_errors"] or candidate_stats.status_errors: exit(1) if __name__ == "__main__": main()