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Datasets:
plantcad
/
genecad-dev

Tasks:
Token Classification
Text Generation
Tags:
genomics
gene-prediction
plants
animals
License:
Dataset card Files
xet
 Community
genecad-dev

Commit History

Upload data/plant/gff/training/Zmarina_top_transcript.gff3 with huggingface_hub
a4c7939
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zongyanliu commited on

Upload data/plant/gff/training/Ncolorata_top_transcript.gff3 with huggingface_hub
c55f119
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zongyanliu commited on

Upload data/plant/gff/training/Dcarota_top_transcript.gff3 with huggingface_hub
1ec3e3e
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zongyanliu commited on

Upload data/plant/gff/training/Ckanehirae_top_transcript.gff3 with huggingface_hub
0be4cb8
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zongyanliu commited on

Upload data/plant/gff/training/Acoerulea_top_transcript.gff3 with huggingface_hub
afe89cc
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zongyanliu commited on

Upload data/plant/fasta/training/Zmarina.softmasked_all.fa.gz with huggingface_hub
502fe32
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zongyanliu commited on

Upload data/plant/fasta/training/Ncolorata.softmasked_all.fa.gz with huggingface_hub
d73ea14
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zongyanliu commited on

Upload data/plant/fasta/training/Dcarota.softmasked_all.fa.gz with huggingface_hub
454b959
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zongyanliu commited on

Upload data/plant/fasta/training/Ckanehirae.softmasked_all.fa.gz with huggingface_hub
3124ed9
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zongyanliu commited on

Upload data/plant/fasta/training/Acoerulea.softmasked_all.fa.gz with huggingface_hub
ca2625a
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zongyanliu commited on

Add GeneCAD prediction FASTA and GFF outputs
87cb389

zongyanliu commited on

modify file structure and add animal data
7d85e68

zongyanliu commited on

Standardise dataset: compress all FASTA to .fa.gz, clean names, remove duplicates
c844d6a

zongyanliu commited on

Add GeneCAD multi-species training data (5 species)
df74284

zongyanliu commited on

add Arabidopsis TAIR12 chromosome 5 genomic sequence (GCA_978657495.1)
a373783
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Zong-Yan Liu commited on

upload GeneCAD example output
4d38b23
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Zong-Yan Liu commited on

Upload data/fasta/Zea_mays-B73-REFERENCE-NAM-5.0.fa.gz with huggingface_hub
4c1cf35
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eczech commited on

Upload data/fasta/Sviridis_726_v4.0.fa with huggingface_hub
f5cc37a
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eczech commited on

Upload data/fasta/Phaseolus_vulgaris-2.0.2_chr1.fasta with huggingface_hub
7464bcc
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eczech commited on

Upload data/fasta/Nicotiana_tabacum_genome.fa.gz with huggingface_hub
bc0b901
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eczech commited on

Upload data/fasta/Nicotiana_tabacum_genome_chr1.fa.gz with huggingface_hub
4182486
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eczech commited on

Upload data/fasta/Nicotiana_tabacum_genome_chr1_clean.fa.gz with huggingface_hub
45813fe
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eczech commited on

Upload data/fasta/Nicotiana_sylvestris_genome_chr1.fa.gz with huggingface_hub
ff70f8a
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eczech commited on

Upload data/fasta/Nicotiana_sylvestris_genome_chr1_clean.fa.gz with huggingface_hub
56e1bb4
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eczech commited on

Upload data/fasta/Juglans_regia.Walnut_2.0.dna.toplevel_chr1.fa with huggingface_hub
0f7fecc
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eczech commited on

Upload data/fasta/Coffea_arabica_geisha.final_chr1.fasta with huggingface_hub
488e09f
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eczech commited on

Upload data/gff/Zea_mays-B73-REFERENCE-NAM-5.0_Zm00001eb.1.gff3.gz with huggingface_hub
e18bbba
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eczech commited on

Upload data/gff/Zea_mays-B73-REFERENCE-NAM-5.0_Zm00001eb.1.gff3 with huggingface_hub
af297e5
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eczech commited on

Upload data/gff/Sviridis_726_v4.1.gene.gff3 with huggingface_hub
940478c
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eczech commited on

Upload data/gff/Pvulgaris.Annotation-EGN-EP-2.0.2.gff with huggingface_hub
c7feb41
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eczech commited on

Upload data/gff/Phaseolus_vulgaris-2.0.2_chr1.gff with huggingface_hub
2d08f09
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eczech commited on

Upload data/gff/Nicotiana_tabacum_annotation.gff3 with huggingface_hub
1ff5f94
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eczech commited on

Upload data/gff/Nicotiana_sylvestris_annotation.gff3 with huggingface_hub
199c6a7
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eczech commited on

Upload data/gff/Juglans_regia.Walnut_2.0.60.gff3 with huggingface_hub
2bd214d
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eczech commited on

Upload data/gff/Juglans_regia.Walnut_2.0.60_chr1.gff3 with huggingface_hub
4bdf743
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eczech commited on

Upload data/gff/Coffea_arabica_geisha.annotation.gff3 with huggingface_hub
5c3cfa0
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eczech commited on

Upload data/gff/Coffea_arabica_geisha.annotation_chr1.gff3 with huggingface_hub
92e5686
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eczech commited on

initial commit
33f7372
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eczech commited on