--- dataset_info: - config_name: Joung-diff-celltype-reserve-engineering-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_line dtype: string - name: cell_file dtype: string - name: marker_info dtype: string splits: - name: train num_bytes: 33565594 num_examples: 33234 - name: validation num_bytes: 4192583 num_examples: 4150 - name: test num_bytes: 4194868 num_examples: 4154 download_size: 940676 dataset_size: 41953045 - config_name: Joung-differentiated-pathway-activity-DE-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 6329175326 num_examples: 9988848 - name: validation num_bytes: 790630510 num_examples: 1247202 - name: test num_bytes: 790767518 num_examples: 1248450 download_size: 3409347532 dataset_size: 7910573354 - config_name: Joung-differentiated-pathway-activity-DE-languageQA- features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 6329175326 num_examples: 9988848 - name: validation num_bytes: 790630510 num_examples: 1247202 - name: test num_bytes: 790767518 num_examples: 1248450 download_size: 3409347532 dataset_size: 7910573354 - config_name: Joung-predict-mapped-cell-type-languageQA features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: TF_gene dtype: string - name: barcode dtype: string - name: cell_line dtype: string - name: differentiated_cell_file dtype: string splits: - name: train num_bytes: 9358413 num_examples: 3717 - name: validation num_bytes: 1170214 num_examples: 465 - name: test num_bytes: 1170734 num_examples: 465 download_size: 1847308 dataset_size: 11699361 - config_name: Joung_TF_deg_vs_ctl_languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 335378586 num_examples: 1396974 - name: validation num_bytes: 41877830 num_examples: 174426 - name: test num_bytes: 41918822 num_examples: 174600 download_size: 35173656 dataset_size: 419175238 - config_name: LINCS-languageQA features: - name: question dtype: string - name: answer dtype: string - name: category dtype: string - name: cell_line dtype: string - name: cmap_name dtype: string - name: sig_id dtype: string - name: gene dtype: string - name: data_source dtype: string - name: data_path dtype: string splits: - name: train num_bytes: 98526458 num_examples: 215603 - name: validation num_bytes: 12197032 num_examples: 26648 - name: test num_bytes: 12308638 num_examples: 26917 download_size: 32154111 dataset_size: 123032128 - config_name: PROGENy-pathways-languageQA features: - name: type dtype: string - name: question dtype: string - name: answer dtype: string - name: gene dtype: string - name: pathways list: string - name: pathway dtype: string - name: top_n dtype: float64 - name: genes list: string - name: weight dtype: float64 - name: direction dtype: string - name: gene1 dtype: string - name: weight1 dtype: float64 - name: gene2 dtype: string - name: weight2 dtype: float64 - name: more_important dtype: string splits: - name: train num_bytes: 11113703 num_examples: 35345 - name: validation num_bytes: 1373573 num_examples: 4369 - name: test num_bytes: 1387304 num_examples: 4413 download_size: 2217948 dataset_size: 13874580 - config_name: Tahoe100M-de-language-six-celllines features: - name: question dtype: string - name: answer dtype: string - name: cell_line dtype: string splits: - name: train num_bytes: 13175516681 num_examples: 88011000 - name: validation num_bytes: 1645109829 num_examples: 10989000 - name: test num_bytes: 1646728308 num_examples: 11000000 download_size: 2513349270 dataset_size: 16467354818 - config_name: Xaira-cell-cycle-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_line dtype: string splits: - name: train num_bytes: 5690837 num_examples: 16002 - name: validation num_bytes: 710494 num_examples: 1998 - name: test num_bytes: 711102 num_examples: 2000 download_size: 1889335 dataset_size: 7112433 - config_name: Xaira-cell-line-origin-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_line dtype: string splits: - name: train num_bytes: 5525074 num_examples: 16002 - name: validation num_bytes: 689789 num_examples: 1998 - name: test num_bytes: 690426 num_examples: 2000 download_size: 1869473 dataset_size: 6905289 - config_name: Xaira-tissue-origin-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_line dtype: string splits: - name: train num_bytes: 6021136 num_examples: 16002 - name: validation num_bytes: 751727 num_examples: 1998 - name: test num_bytes: 752426 num_examples: 2000 download_size: 1894443 dataset_size: 7525289 - config_name: bioreason-MSigDB-languageQA features: - name: type dtype: string - name: collection dtype: string - name: question dtype: string - name: answer dtype: string splits: - name: train num_bytes: 10771811 num_examples: 25389 - name: validation num_bytes: 1288952 num_examples: 3139 - name: test num_bytes: 1346545 num_examples: 3170 download_size: 6735159 dataset_size: 13407308 - config_name: celltypist_qa features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string splits: - name: markers_to_celltype num_bytes: 26565 num_examples: 196 - name: tissue_markers_to_celltype num_bytes: 60615 num_examples: 433 download_size: 17939 dataset_size: 87180 - config_name: cellxgene-celltype-given-marker-genes features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: tissue dtype: string splits: - name: train num_bytes: 809200.2073170731 num_examples: 1836 - name: validation num_bytes: 101370.39634146342 num_examples: 230 - name: test num_bytes: 101370.39634146342 num_examples: 230 download_size: 335760 dataset_size: 1011941.0 - config_name: cellxgene-celltype-pathway-activity-DE-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_type_1 dtype: string - name: cell_type_2 dtype: string splits: - name: train num_bytes: 9790494102 num_examples: 13711291 - name: validation num_bytes: 8702682242 num_examples: 12189337 - name: test num_bytes: 1087811860 num_examples: 1521954 download_size: 8070905777 dataset_size: 19580988204 - config_name: cellxgene-celltypeannotation_c2sformat features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: cell_file dtype: string - name: reasoning dtype: string splits: - name: train num_bytes: 168647214 num_examples: 196024 - name: validation num_bytes: 21069610 num_examples: 24476 - name: test num_bytes: 21075245 num_examples: 24500 download_size: 57099673 dataset_size: 210792069 - config_name: cellxgene-disease-pathway-activity-DE-languageQA features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: data_path_normal dtype: string - name: data_path_disease dtype: string - name: dataset dtype: string splits: - name: train num_bytes: 155859624 num_examples: 201426 - name: validation num_bytes: 138550151 num_examples: 179067 - name: test num_bytes: 17309473 num_examples: 22359 download_size: 114728443 dataset_size: 311719248 - config_name: cellxgene-disease-state-prediction features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: disease_state dtype: string - name: tissue dtype: string - name: dataset_name dtype: string - name: data_path dtype: string splits: - name: train num_bytes: 59069905 num_examples: 52662 - name: validation num_bytes: 7378526 num_examples: 6581 - name: test num_bytes: 7390810 num_examples: 6586 download_size: 14538157 dataset_size: 73839241 - config_name: cellxgene-gene-regulation-disease-vs-normal features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: dataset dtype: string - name: data_path_disease dtype: string - name: data_path_normal dtype: string splits: - name: train num_bytes: 33473832 num_examples: 63586 - name: validation num_bytes: 4177717 num_examples: 7940 - name: test num_bytes: 4179144 num_examples: 7948 download_size: 1991294 dataset_size: 41830693 - config_name: cellxgene-tissue-given-marker-genes features: - name: question_type dtype: string - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string splits: - name: train num_bytes: 902575.2062588905 num_examples: 2249 - name: validation num_bytes: 112771.73541963016 num_examples: 281 - name: test num_bytes: 113173.05832147937 num_examples: 282 download_size: 376292 dataset_size: 1128520.0 - config_name: collectri-regulon-languageQA features: - name: type dtype: string - name: question dtype: string - name: answer dtype: string splits: - name: train num_bytes: 3005633 num_examples: 18426 - name: validation num_bytes: 365737 num_examples: 2278 - name: test num_bytes: 381681 num_examples: 2301 download_size: 1180414 dataset_size: 3753051 - config_name: depmap-integrative-languageQA features: - name: question dtype: string - name: answer dtype: string - name: category dtype: string - name: model_id dtype: string - name: cell_name dtype: string - name: gene dtype: string - name: is_dependency dtype: float64 - name: moa dtype: string - name: drug dtype: string - name: is_sensitive dtype: float64 - name: cell_file dtype: string splits: - name: train num_bytes: 813930545 num_examples: 241548 - name: validation num_bytes: 100774421 num_examples: 29855 - name: test num_bytes: 101657875 num_examples: 30156 download_size: 615461192 dataset_size: 1016362841 - config_name: msigdb-geneset-catalog features: - name: collection dtype: string - name: collection_name dtype: string - name: pathway dtype: string - name: genes list: string splits: - name: train num_bytes: 10670393 num_examples: 14742 download_size: 2331841 dataset_size: 10670393 - config_name: panglaodb_qa_markers_to_celltype features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string splits: - name: train num_bytes: 67890 num_examples: 429 download_size: 17763 dataset_size: 67890 - config_name: panglaodb_qa_species_organ_markers_to_celltype features: - name: question dtype: string - name: answer dtype: string - name: cell_type dtype: string - name: organ dtype: string - name: species dtype: string splits: - name: train num_bytes: 71230 num_examples: 360 download_size: 19675 dataset_size: 71230 - config_name: pathways features: - name: pathway dtype: string - name: genes list: string - name: full_description dtype: string - name: brief_description dtype: string splits: - name: pathways num_bytes: 13211887 num_examples: 14743 download_size: 3489604 dataset_size: 13211887 - config_name: perturbQA-DE-Vision-languageQA features: - name: question dtype: string - name: answer dtype: string - name: dataset dtype: string - name: gene_target dtype: string - name: data_path dtype: string splits: - name: train num_bytes: 1847250602 num_examples: 2599518 - name: validation num_bytes: 230723574 num_examples: 324575 - name: test num_bytes: 230783751 num_examples: 324900 download_size: 775116383 dataset_size: 2308757927 - config_name: perturbqa_gse_gene_qa features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 403026.17004048586 num_examples: 666 - name: validation num_bytes: 45385.82995951417 num_examples: 75 - name: test num_bytes: 45385.82995951417 num_examples: 75 download_size: 85831 dataset_size: 493797.8299595142 - config_name: perturbqa_gse_pert_qa features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 322173.9409937888 num_examples: 579 - name: validation num_bytes: 36168.05900621118 num_examples: 65 - name: test num_bytes: 36168.05900621118 num_examples: 65 download_size: 67936 dataset_size: 394510.0590062112 - config_name: perturbqa_pert_de_qa features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 81183624.3 num_examples: 576288 - name: validation num_bytes: 9020402.7 num_examples: 64032 - name: test num_bytes: 9020402.7 num_examples: 64032 download_size: 15571780 dataset_size: 99224429.7 - config_name: perturbqa_pert_de_qa_train_test_split features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 73091291 num_examples: 519044 - name: test num_bytes: 17112736 num_examples: 121276 - name: validation num_bytes: 17112736 num_examples: 121276 download_size: 8942512 dataset_size: 107316763 - config_name: perturbqa_pert_dir_qa features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 14536287.20305006 num_examples: 88758 - name: validation num_bytes: 1615306.7969499396 num_examples: 9863 - name: test num_bytes: 1615306.7969499396 num_examples: 9863 download_size: 2294527 dataset_size: 17766900.796949938 - config_name: perturbqa_pert_dir_qa_train_test_split features: - name: question dtype: string - name: reasoning dtype: string - name: answer dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 13027313 num_examples: 79581 - name: test num_bytes: 3124281 num_examples: 19040 - name: validation num_bytes: 3124281 num_examples: 19040 download_size: 1340734 dataset_size: 19275875 - config_name: reasoning-scBaseCount-differential-Vision features: - name: srx_accession dtype: large_string - name: cell_id dtype: large_string - name: cell_type dtype: large_string - name: cell_file dtype: large_string - name: up_pathways dtype: large_string - name: down_pathways dtype: large_string splits: - name: train_t_cell num_bytes: 5528699142 num_examples: 611618 - name: validation_t_cell num_bytes: 685738159 num_examples: 76150 - name: test_t_cell num_bytes: 690478425 num_examples: 76273 - name: train_basal_cell num_bytes: 21919177049 num_examples: 607780 - name: train_erythrocyte num_bytes: 21641476065 num_examples: 2529125 - name: validation_basal_cell num_bytes: 2738902470 num_examples: 75994 - name: test_basal_cell num_bytes: 2723887679 num_examples: 75504 - name: train_endothelial_cell num_bytes: 28628130327 num_examples: 866509 - name: validation_endothelial_cell num_bytes: 3575350492 num_examples: 108132 - name: train_classical_monocyte num_bytes: 30328918893 num_examples: 875492 - name: test_endothelial_cell num_bytes: 3556056459 num_examples: 107554 - name: validation_classical_monocyte num_bytes: 3795435268 num_examples: 109725 - name: test_classical_monocyte num_bytes: 3769832277 num_examples: 108891 - name: train_luminal_epithelial_cell_of_mammary_gland num_bytes: 17896810322 num_examples: 476364 - name: train_neutrophil num_bytes: 8472039309 num_examples: 465531 - name: validation_luminal_epithelial_cell_of_mammary_gland num_bytes: 2225522965 num_examples: 59332 - name: validation_neutrophil num_bytes: 1051817837 num_examples: 57875 - name: test_neutrophil num_bytes: 1051631570 num_examples: 57795 - name: test_luminal_epithelial_cell_of_mammary_gland num_bytes: 2230202830 num_examples: 59339 - name: train_natural_killer_cell num_bytes: 17180897285 num_examples: 2227459 - name: validation_natural_killer_cell num_bytes: 2147613433 num_examples: 278129 - name: test_natural_killer_cell num_bytes: 2145512544 num_examples: 278509 - name: train_smooth_muscle_cell num_bytes: 7792581092 num_examples: 464992 - name: validation_smooth_muscle_cell num_bytes: 971331019 num_examples: 58138 - name: test_smooth_muscle_cell num_bytes: 965978169 num_examples: 57706 - name: train_naive_thymus_derived_cd4_positive__alpha_beta_t_cell num_bytes: 26656119470 num_examples: 1010323 - name: validation_naive_thymus_derived_cd4_positive__alpha_beta_t_cell num_bytes: 3325577221 num_examples: 126066 - name: test_naive_thymus_derived_cd4_positive__alpha_beta_t_cell num_bytes: 3309775607 num_examples: 125332 - name: train_plasma_cell num_bytes: 18909960036 num_examples: 2441845 - name: validation_plasma_cell num_bytes: 2370501404 num_examples: 305399 - name: test_plasma_cell num_bytes: 2359040086 num_examples: 304708 download_size: 88180443100 dataset_size: 250644994904 - config_name: reasoning_nadig_replogle features: - name: gene_target dtype: string - name: protein_target dtype: string - name: cell_type dtype: string - name: tissue_type dtype: string - name: up_pathways list: string - name: down_pathways list: string - name: unchanged_pathways list: string - name: experiment dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 48606335 num_examples: 959 - name: test num_bytes: 63919601 num_examples: 1053 download_size: 4896374 dataset_size: 112525936 - config_name: reasoning_nadig_replogle_SEPARATED_PATHWAYS features: - name: gene_target dtype: string - name: protein_target dtype: string - name: cell_type dtype: string - name: tissue_type dtype: string - name: pathway_name dtype: string - name: pathway_change dtype: string - name: pathway_score dtype: float64 - name: experiment dtype: string - name: cell_file dtype: string splits: - name: train num_bytes: 282231252 num_examples: 1122415 - name: test num_bytes: 371936771 num_examples: 1476786 download_size: 28261190 dataset_size: 654168023 configs: - config_name: Joung-diff-celltype-reserve-engineering-languageQA data_files: - split: train path: Joung-diff-celltype-reserve-engineering-languageQA/train-* - split: validation path: Joung-diff-celltype-reserve-engineering-languageQA/validation-* - split: test path: Joung-diff-celltype-reserve-engineering-languageQA/test-* - config_name: Joung-differentiated-pathway-activity-DE-languageQA data_files: - split: train path: Joung-differentiated-pathway-activity-DE-languageQA/train-* - split: validation path: Joung-differentiated-pathway-activity-DE-languageQA/validation-* - split: test path: Joung-differentiated-pathway-activity-DE-languageQA/test-* - config_name: Joung-differentiated-pathway-activity-DE-languageQA- data_files: - split: train path: Joung-differentiated-pathway-activity-DE-languageQA-/train-* - split: validation path: Joung-differentiated-pathway-activity-DE-languageQA-/validation-* - split: test path: Joung-differentiated-pathway-activity-DE-languageQA-/test-* - config_name: Joung-predict-mapped-cell-type-languageQA data_files: - split: train path: Joung-predict-mapped-cell-type-languageQA/train-* - split: validation path: Joung-predict-mapped-cell-type-languageQA/validation-* - split: test path: Joung-predict-mapped-cell-type-languageQA/test-* - config_name: Joung_TF_deg_vs_ctl_languageQA data_files: - split: train path: Joung_TF_deg_vs_ctl_languageQA/train-* - split: validation path: Joung_TF_deg_vs_ctl_languageQA/validation-* - split: test path: Joung_TF_deg_vs_ctl_languageQA/test-* - config_name: LINCS-languageQA data_files: - split: train path: LINCS-languageQA/train-* - split: validation path: LINCS-languageQA/validation-* - split: test path: LINCS-languageQA/test-* - config_name: PROGENy-pathways-languageQA data_files: - split: train path: PROGENy-pathways-languageQA/train-* - split: validation path: PROGENy-pathways-languageQA/validation-* - split: test path: PROGENy-pathways-languageQA/test-* - config_name: Tahoe100M-de-language-six-celllines data_files: - split: train path: Tahoe100M-de-language-six-celllines/train-* - split: validation path: Tahoe100M-de-language-six-celllines/validation-* - split: test path: Tahoe100M-de-language-six-celllines/test-* - config_name: Xaira-cell-cycle-languageQA data_files: - split: train path: Xaira-cell-cycle-languageQA/train-* - split: validation path: Xaira-cell-cycle-languageQA/validation-* - split: test path: Xaira-cell-cycle-languageQA/test-* - config_name: Xaira-cell-line-origin-languageQA data_files: - split: train path: Xaira-cell-line-origin-languageQA/train-* - split: validation path: Xaira-cell-line-origin-languageQA/validation-* - split: test path: Xaira-cell-line-origin-languageQA/test-* - config_name: Xaira-tissue-origin-languageQA data_files: - split: train path: Xaira-tissue-origin-languageQA/train-* - split: validation path: Xaira-tissue-origin-languageQA/validation-* - split: test path: Xaira-tissue-origin-languageQA/test-* - config_name: bioreason-MSigDB-languageQA data_files: - split: train path: bioreason-MSigDB-languageQA/train-* - split: validation path: bioreason-MSigDB-languageQA/validation-* - split: test path: bioreason-MSigDB-languageQA/test-* - config_name: celltypist_qa data_files: - split: markers_to_celltype path: celltypist_qa/markers_to_celltype-* - split: tissue_markers_to_celltype path: celltypist_qa/tissue_markers_to_celltype-* - config_name: cellxgene-celltype-given-marker-genes data_files: - split: train path: cellxgene-celltype-given-marker-genes/train-* - split: validation path: cellxgene-celltype-given-marker-genes/validation-* - split: test path: cellxgene-celltype-given-marker-genes/test-* - config_name: cellxgene-celltype-pathway-activity-DE-languageQA data_files: - split: train path: cellxgene-celltype-pathway-activity-DE-languageQA/train-* - split: validation path: cellxgene-celltype-pathway-activity-DE-languageQA/validation-* - split: test path: cellxgene-celltype-pathway-activity-DE-languageQA/test-* - config_name: cellxgene-celltypeannotation_c2sformat data_files: - split: train path: cellxgene-celltypeannotation_c2sformat/train-* - split: validation path: cellxgene-celltypeannotation_c2sformat/validation-* - split: test path: cellxgene-celltypeannotation_c2sformat/test-* - config_name: cellxgene-disease-pathway-activity-DE-languageQA data_files: - split: train path: cellxgene-disease-pathway-activity-DE-languageQA/train-* - split: validation path: cellxgene-disease-pathway-activity-DE-languageQA/validation-* - split: test path: cellxgene-disease-pathway-activity-DE-languageQA/test-* - config_name: cellxgene-disease-state-prediction data_files: - split: train path: cellxgene-disease-state-prediction/train-* - split: validation path: cellxgene-disease-state-prediction/validation-* - split: test path: cellxgene-disease-state-prediction/test-* - config_name: cellxgene-gene-regulation-disease-vs-normal data_files: - split: train path: cellxgene-gene-regulation-disease-vs-normal/train-* - split: validation path: cellxgene-gene-regulation-disease-vs-normal/validation-* - split: test path: cellxgene-gene-regulation-disease-vs-normal/test-* - config_name: cellxgene-tissue-given-marker-genes data_files: - split: train path: cellxgene-tissue-given-marker-genes/train-* - split: validation path: cellxgene-tissue-given-marker-genes/validation-* - split: test path: cellxgene-tissue-given-marker-genes/test-* - config_name: collectri-regulon-languageQA data_files: - split: train path: collectri-regulon-languageQA/train-* - split: validation path: collectri-regulon-languageQA/validation-* - split: test path: collectri-regulon-languageQA/test-* - config_name: depmap-integrative-languageQA data_files: - split: train path: depmap-integrative-languageQA/train-* - split: validation path: depmap-integrative-languageQA/validation-* - split: test path: depmap-integrative-languageQA/test-* - config_name: msigdb-geneset-catalog data_files: - split: train path: msigdb-geneset-catalog/train-* - config_name: panglaodb_qa_markers_to_celltype data_files: - split: train path: panglaodb_qa_markers_to_celltype/train-* - config_name: panglaodb_qa_species_organ_markers_to_celltype data_files: - split: train path: panglaodb_qa_species_organ_markers_to_celltype/train-* - config_name: pathways data_files: - split: pathways path: pathways/pathways-* - config_name: perturbQA-DE-Vision-languageQA data_files: - split: train path: perturbQA-DE-Vision-languageQA/train-* - split: validation path: perturbQA-DE-Vision-languageQA/validation-* - split: test path: perturbQA-DE-Vision-languageQA/test-* - config_name: perturbqa_gse_gene_qa data_files: - split: train path: perturbqa_gse_gene_qa/train-* - split: validation path: perturbqa_gse_gene_qa/validation-* - split: test path: perturbqa_gse_gene_qa/test-* - config_name: perturbqa_gse_pert_qa data_files: - split: train path: perturbqa_gse_pert_qa/train-* - split: validation path: perturbqa_gse_pert_qa/validation-* - split: test path: perturbqa_gse_pert_qa/test-* - config_name: perturbqa_pert_de_qa data_files: - split: train path: perturbqa_pert_de_qa/train-* - split: validation path: perturbqa_pert_de_qa/validation-* - split: test path: perturbqa_pert_de_qa/test-* - config_name: perturbqa_pert_de_qa_train_test_split data_files: - split: train path: perturbqa_pert_de_qa_train_test_split/train-* - split: test path: perturbqa_pert_de_qa_train_test_split/test-* - split: validation path: perturbqa_pert_de_qa_train_test_split/validation-* - config_name: perturbqa_pert_dir_qa data_files: - split: train path: perturbqa_pert_dir_qa/train-* - split: validation path: perturbqa_pert_dir_qa/validation-* - split: test path: perturbqa_pert_dir_qa/test-* - config_name: perturbqa_pert_dir_qa_train_test_split data_files: - split: train path: perturbqa_pert_dir_qa_train_test_split/train-* - split: test path: perturbqa_pert_dir_qa_train_test_split/test-* - split: validation path: perturbqa_pert_dir_qa_train_test_split/validation-* - config_name: reasoning-scBaseCount-differential-Vision data_files: - split: train_t_cell path: reasoning-scBaseCount-differential-Vision/train_t_cell-* - split: validation_t_cell path: reasoning-scBaseCount-differential-Vision/validation_t_cell-* - split: test_t_cell path: reasoning-scBaseCount-differential-Vision/test_t_cell-* - split: train_basal_cell path: reasoning-scBaseCount-differential-Vision/train_basal_cell-* - split: train_erythrocyte path: reasoning-scBaseCount-differential-Vision/train_erythrocyte-* - split: validation_basal_cell path: reasoning-scBaseCount-differential-Vision/validation_basal_cell-* - split: test_basal_cell path: reasoning-scBaseCount-differential-Vision/test_basal_cell-* - split: train_endothelial_cell path: reasoning-scBaseCount-differential-Vision/train_endothelial_cell-* - split: validation_endothelial_cell path: reasoning-scBaseCount-differential-Vision/validation_endothelial_cell-* - split: train_classical_monocyte path: reasoning-scBaseCount-differential-Vision/train_classical_monocyte-* - split: test_endothelial_cell path: reasoning-scBaseCount-differential-Vision/test_endothelial_cell-* - split: validation_classical_monocyte path: reasoning-scBaseCount-differential-Vision/validation_classical_monocyte-* - split: test_classical_monocyte path: reasoning-scBaseCount-differential-Vision/test_classical_monocyte-* - split: train_luminal_epithelial_cell_of_mammary_gland path: reasoning-scBaseCount-differential-Vision/train_luminal_epithelial_cell_of_mammary_gland-* - split: train_neutrophil path: reasoning-scBaseCount-differential-Vision/train_neutrophil-* - split: validation_luminal_epithelial_cell_of_mammary_gland path: reasoning-scBaseCount-differential-Vision/validation_luminal_epithelial_cell_of_mammary_gland-* - split: validation_neutrophil path: reasoning-scBaseCount-differential-Vision/validation_neutrophil-* - split: test_neutrophil path: reasoning-scBaseCount-differential-Vision/test_neutrophil-* - split: test_luminal_epithelial_cell_of_mammary_gland path: reasoning-scBaseCount-differential-Vision/test_luminal_epithelial_cell_of_mammary_gland-* - split: train_natural_killer_cell path: reasoning-scBaseCount-differential-Vision/train_natural_killer_cell-* - split: validation_natural_killer_cell path: reasoning-scBaseCount-differential-Vision/validation_natural_killer_cell-* - split: test_natural_killer_cell path: reasoning-scBaseCount-differential-Vision/test_natural_killer_cell-* - split: train_smooth_muscle_cell path: reasoning-scBaseCount-differential-Vision/train_smooth_muscle_cell-* - split: validation_smooth_muscle_cell path: reasoning-scBaseCount-differential-Vision/validation_smooth_muscle_cell-* - split: test_smooth_muscle_cell path: reasoning-scBaseCount-differential-Vision/test_smooth_muscle_cell-* - split: train_naive_thymus_derived_cd4_positive__alpha_beta_t_cell path: reasoning-scBaseCount-differential-Vision/train_naive_thymus_derived_cd4_positive__alpha_beta_t_cell-* - split: validation_naive_thymus_derived_cd4_positive__alpha_beta_t_cell path: reasoning-scBaseCount-differential-Vision/validation_naive_thymus_derived_cd4_positive__alpha_beta_t_cell-* - split: test_naive_thymus_derived_cd4_positive__alpha_beta_t_cell path: reasoning-scBaseCount-differential-Vision/test_naive_thymus_derived_cd4_positive__alpha_beta_t_cell-* - split: train_plasma_cell path: reasoning-scBaseCount-differential-Vision/train_plasma_cell-* - split: validation_plasma_cell path: reasoning-scBaseCount-differential-Vision/validation_plasma_cell-* - split: test_plasma_cell path: reasoning-scBaseCount-differential-Vision/test_plasma_cell-* - config_name: reasoning_nadig_replogle data_files: - split: train path: reasoning_nadig_replogle/train-* - split: test path: reasoning_nadig_replogle/test-* - config_name: reasoning_nadig_replogle_SEPARATED_PATHWAYS data_files: - split: train path: reasoning_nadig_replogle_SEPARATED_PATHWAYS/train-* - split: test path: reasoning_nadig_replogle_SEPARATED_PATHWAYS/test-* ---