###############################################################################
# Caleydo - Visualization for Molecular Biology - http://caleydo.org
# Copyright (c) The Caleydo Team. All rights reserved.
# Licensed under the new BSD license, available at http://caleydo.org/license
###############################################################################


from builtins import object
import os
import jsoncfg
import codecs
from ._utils import replace_nested_variables, extend
import logging

_log = logging.getLogger(__name__)
_c = None
_pre_merge_changes = {}


# method to control call of _init_config()
def _initialize():
  _init_config()


def get(item, section=None, default=None):
  # use global _c
  global _c
  key = item if section is None else section + '.' + item
  keys = key.split('.')
  act = _c
  for p in keys[0:-1]:
    act = act.get(p, {})
  last_key = keys[len(keys) - 1]

  if last_key not in act:
    # prop does not exist
    return default

  v = act[last_key]

  def resolve(x):
    if '.' in x:  # assume absolute
      return get(x)
    else:
      return act.get(x, None)

  v = replace_nested_variables(v, resolve)
  # print key, v

  return v


def set(item, value, section=None):
  global _c, _pre_merge_changes
  key = item if section is None else section + '.' + item
  keys = key.split('.')
  act = _c
  for p in keys[0:-1]:
    if p not in act:
      act[p] = {}
    act = act[p]
  act[keys[len(keys) - 1]] = value

  if _pre_merge_changes is not None:
    # keep track of changes that were done before the recreation of the configuration
    act = _pre_merge_changes
    for p in keys[0:-1]:
      if p not in act:
        act[p] = {}
      act = act[p]
    act[keys[len(keys) - 1]] = value


def getint(item, section=None, default=0):
  return int(get(item, section, default))


def getfloat(item, section=None, default=0.):
  return float(get(item, section, default))


def getboolean(item, section=None, default=False):
  return bool(get(item, section, default))


def getlist(item, section=None, separator='\n', default=[]):
  v = get(item, section, default)
  return v if isinstance(v, list) else v.split(separator)


def view(section):
  return CaleydoConfigSection(section)


class CaleydoConfigSection(object):
  def __init__(self, section):
    self._section = section

  def __getattr__(self, item):
    return self.get(item)

  def __getitem__(self, item):
    return self.get(item)

  def _expand(self, section=None):
    if self._section is None:
      return section
    return self._section + ('.' + section if section is not None else '')

  def get(self, item, section=None, default=None):
    return get(item, self._expand(section), default=default)

  def set(self, item, value, section=None):
    return set(item, value, self._expand(section))

  def getint(self, item, section=None, default=0):
    return getint(item, self._expand(section), default=default)

  def getfloat(self, item, section=None, default=0.):
    return getfloat(item, self._expand(section), default=default)

  def getboolean(self, item, section=None, default=False):
    return getboolean(item, self._expand(section), default=default)

  def getlist(self, item, section=None, separator='\n', default=[]):
    return getlist(item, self._expand(section), separator, default=default)

  def view(self, section):
    return CaleydoConfigSection(self._expand(section))


# add global_config as parameter and call extend() in return statement
def _merge_config(global_config, config_file, plugin_id):
  _log.info(plugin_id)
  # check initialization
  if global_config is None:
    _initialize()
  with codecs.open(config_file, 'r', 'utf-8') as fi:
    c = jsoncfg.loads(fi.read())
  return extend(global_config, {plugin_id: c})


def _init_config():
  from .__init__ import phovea_config
  f = phovea_config()
  global _c
  if _c is not None:
    return
  print('init config')
  _c = {}
  _c = _merge_config(_c, f, 'phovea_server')
  global_ = os.path.abspath(os.environ.get('PHOVEA_CONFIG_PATH', 'config.json'))
  if os.path.exists(global_) and global_ != f:
    print(('configuration file: ' + global_))
    with codecs.open(global_, 'r', 'utf-8') as fi:
      extend(_c, jsoncfg.loads(fi.read()))


def merge_plugin_configs(plugins):
  # merge all the plugins
  global _c, _pre_merge_changes
  # check initialization
  if _c is None:
    _initialize()
  for plugin in plugins:
    f = plugin.config_file()
    if f:
      _log.info('merging config of %s', plugin.id)
      # improved usage of method in context
      _c = _merge_config(_c, f, plugin.id)

  # override with more important settings
  global_ = os.path.abspath(os.environ.get('PHOVEA_CONFIG_PATH', 'config.json'))
  if os.path.exists(global_):
    with codecs.open(global_, 'r', 'utf-8') as fi:
      extend(_c, jsoncfg.loads(fi.read()))
  # merge changes done before the merge
  # check whether _pre_merge_changes is of NoneType
  if _pre_merge_changes is not None:
    extend(_c, _pre_merge_changes)
    _pre_merge_changes = None

###############################################################################
# Caleydo - Visualization for Molecular Biology - http://caleydo.org
# Copyright (c) The Caleydo Team. All rights reserved.
# Licensed under the new BSD license, available at http://caleydo.org/license
###############################################################################


from builtins import object
import os
import jsoncfg
import codecs
from ._utils import replace_nested_variables, extend
import logging

_log = logging.getLogger(__name__)
_c = None
_pre_merge_changes = {}


# method to control call of _init_config()
def _initialize():
  _init_config()


def get(item, section=None, default=None):
  # use global _c
  global _c
  key = item if section is None else section + '.' + item
  keys = key.split('.')
  act = _c
  for p in keys[0:-1]:
    act = act.get(p, {})
  last_key = keys[len(keys) - 1]

  if last_key not in act:
    # prop does not exist
    return default

  v = act[last_key]

  def resolve(x):
    if '.' in x:  # assume absolute
      return get(x)
    else:
      return act.get(x, None)

  v = replace_nested_variables(v, resolve)
  # print key, v

  return v


def set(item, value, section=None):
  global _c, _pre_merge_changes
  key = item if section is None else section + '.' + item
  keys = key.split('.')
  act = _c
  for p in keys[0:-1]:
    if p not in act:
      act[p] = {}
    act = act[p]
  act[keys[len(keys) - 1]] = value

  if _pre_merge_changes is not None:
    # keep track of changes that were done before the recreation of the configuration
    act = _pre_merge_changes
    for p in keys[0:-1]:
      if p not in act:
        act[p] = {}
      act = act[p]
    act[keys[len(keys) - 1]] = value


def getint(item, section=None, default=0):
  return int(get(item, section, default))


def getfloat(item, section=None, default=0.):
  return float(get(item, section, default))


def getboolean(item, section=None, default=False):
  return bool(get(item, section, default))


def getlist(item, section=None, separator='\n', default=[]):
  v = get(item, section, default)
  return v if isinstance(v, list) else v.split(separator)


def view(section):
  return CaleydoConfigSection(section)


class CaleydoConfigSection(object):
  def __init__(self, section):
    self._section = section

  def __getattr__(self, item):
    return self.get(item)

  def __getitem__(self, item):
    return self.get(item)

  def _expand(self, section=None):
    if self._section is None:
      return section
    return self._section + ('.' + section if section is not None else '')

  def get(self, item, section=None, default=None):
    return get(item, self._expand(section), default=default)

  def set(self, item, value, section=None):
    return set(item, value, self._expand(section))

  def getint(self, item, section=None, default=0):
    return getint(item, self._expand(section), default=default)

  def getfloat(self, item, section=None, default=0.):
    return getfloat(item, self._expand(section), default=default)

  def getboolean(self, item, section=None, default=False):
    return getboolean(item, self._expand(section), default=default)

  def getlist(self, item, section=None, separator='\n', default=[]):
    return getlist(item, self._expand(section), separator, default=default)

  def view(self, section):
    return CaleydoConfigSection(self._expand(section))


# add global_config as parameter and call extend() in return statement
def _merge_config(global_config, config_file, plugin_id):
  _log.info(plugin_id)
  # check initialization
  if global_config is None:
    _initialize()
  with codecs.open(config_file, 'r', 'utf-8') as fi:
    c = jsoncfg.loads(fi.read())
  return extend(global_config, {plugin_id: c})


def _init_config():
  from .__init__ import phovea_config
  f = phovea_config()
  global _c
  if _c is not None:
    return
  print('init config')
  _c = {}
  _c = _merge_config(_c, f, 'phovea_server')
  global_ = os.path.abspath(os.environ.get('PHOVEA_CONFIG_PATH', 'config.json'))
  if os.path.exists(global_) and global_ != f:
    print(('configuration file: ' + global_))
    with codecs.open(global_, 'r', 'utf-8') as fi:
      extend(_c, jsoncfg.loads(fi.read()))


def merge_plugin_configs(plugins):
  # merge all the plugins
  global _c, _pre_merge_changes
  # check initialization
  if _c is None:
    _initialize()
  for plugin in plugins:
    f = plugin.config_file()
    if f:
      _log.info('merging config of %s', plugin.id)
      # improved usage of method in context
      _c = _merge_config(_c, f, plugin.id)

  # override with more important settings
  global_ = os.path.abspath(os.environ.get('PHOVEA_CONFIG_PATH', 'config.json'))
  if os.path.exists(global_):
    with codecs.open(global_, 'r', 'utf-8') as fi:
      extend(_c, jsoncfg.loads(fi.read()))
  # merge changes done before the merge
  # check whether _pre_merge_changes is of NoneType
  if _pre_merge_changes is not None:
    extend(_c, _pre_merge_changes)
    _pre_merge_changes = None

############################################################################### # Caleydo - Visualization for Molecular Biology - http://caleydo.org # Copyright (c) The Caleydo Team. All rights reserved. # Licensed under the new BSD license, available at http://caleydo.org/license ############################################################################### # method to control call of _init_config() # use global _c # prop does not exist # assume absolute # print key, v # keep track of changes that were done before the recreation of the configuration # add global_config as parameter and call extend() in return statement # check initialization # merge all the plugins # check initialization # improved usage of method in context # override with more important settings # merge changes done before the merge # check whether _pre_merge_changes is of NoneType