| --- |
| license: apache-2.0 |
| task_categories: |
| - image-classification |
| tags: |
| - bacteria |
| - microscopy |
| - biology |
| - medical |
| size_categories: |
| - n<1K |
| --- |
| |
| # Bacteria Classification Test Dataset |
|
|
| Test dataset for bacteria classification using ConvNext model. |
|
|
| ## Dataset Description |
|
|
| This dataset contains microscopic images of bacteria for classification tasks. |
|
|
| ## Dataset Structure |
| ``` |
| test/ |
| ├── class_1/ |
| │ ├── image1.jpg |
| │ └── ... |
| ├── class_2/ |
| └── ... |
| ``` |
|
|
| ## Usage |
|
|
| ### Quick Download |
| ```bash |
| pip install huggingface_hub |
| python download_test_data.py |
| ``` |
|
|
| ### Download via Python |
| ```python |
| from huggingface_hub import snapshot_download |
| |
| dataset_path = snapshot_download( |
| repo_id="archiesinaga/bacteria-classification-test-data", |
| repo_type="dataset", |
| local_dir="./test" |
| ) |
| print(f"Dataset downloaded to: {dataset_path}") |
| ``` |
|
|
| ### Download via CLI |
| ```bash |
| huggingface-cli download \ |
| archiesinaga/bacteria-classification-test-data \ |
| --repo-type dataset \ |
| --local-dir ./test |
| ``` |
|
|
| ## Use with Project |
|
|
| This dataset is designed to work with the bacteria classification project: |
| ```bash |
| # Clone project |
| git clone https://github.com/archiesinaga/bacteria-classification.git |
| cd bacteria-classification |
| |
| # Setup environment |
| python -m venv venv |
| source venv/bin/activate |
| pip install -r requirements.txt |
| |
| # Download model and dataset |
| python download_model.py |
| python download_test_data.py |
| |
| # Run evaluation |
| python evaluasi.py |
| ``` |
|
|
| ## Related Resources |
|
|
| - **GitHub Repository**: [bacteria-classification](https://github.com/archiesinaga/bacteria-classification) |
| - **Pre-trained Model**: [bacteria-classification-convnext](https://huggingface.co/archiesinaga/bacteria-classification-convnext) |
|
|
| ## Citation |
| ```bibtex |
| @dataset{bacteria_test_data_2024, |
| author = {Archie Sinaga}, |
| title = {Bacteria Classification Test Dataset}, |
| year = {2024}, |
| publisher = {Hugging Face}, |
| howpublished = {\url{https://huggingface.co/datasets/archiesinaga/bacteria-classification-test-data}} |
| } |
| ``` |
|
|
| ## License |
|
|
| Apache 2.0 |
|
|